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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916724.1_cds_XP_016466419.1_59273
CDS Infomation

[gene=LOC107789160] [db_xref=GeneID:107789160] [protein=protein NSP-INTERACTING KINASE 3-like] [protein_id=XP_016466419.1] [location=join(4531..4633,4830..4962,5045..5116,5215..5358,5458..5529,5634..5693,5970..6067,6208..6354,7263..7604,8187..8578,8793..9110)] [gbkey=CDS]
Sequence

ATGGAGGGAAAGTGGTGTATGCTCTGGTATGTGGGGTTGCTGGTTTTAACATTGATGGAG
AGTTGTTATGCTTCTCTTTCCCCTACTGGCATTAATTATGAAGTTGTTGCTTTGACGGAA
ATTAAGAAGGCGTTACATGATCCTTACAATGTTCTGGAGAATTGGGATGTGACTTCTGTG
GACCCTTGCAGTTGGAGAATGGTCACTTGTTCCATTGATGGCTATGTTTCTGCTCTTGGA
CTACCTAGTCAAAGTCTATCTGGAACATTATCACCTGGAATAGGCAACCTCACTAAATTG
CAATCTGTATTGCTGCAAAACAATGCTATTTCTGGTCCTATTCCTGATGTGATTGGGAAT
TTGGAAAAGCTTCAGACACTTGATCTCTCCAACAACAAATTTGAAGGCGAAATGCCTGCT
TCTTTCGGAGACCTGAGGAATTTAAATTATTTGCGACTAAACAACAATAGCCTCACGGGA
TCCATTCCTCAATATCTCTCTAACATTGAAGGACTTGCTCTTGTGGATGTTTCTTTTAAT
AATCTTGGTGGTCCACTGCCTAAAATATCAGCAAGAGCGTTCAAAGTTGTTGGAAATCCT
TTAATTTGTGGCCAAAGTTCTGGGAACAATTGTTCTGCAGTCTATCCAGAACCGCTATCA
TTCCCGCCAGATAGTTTAGGAGATAAATCAGGAGCAGGAGGTAAAAGCCATCATGTCGCT
GTTGCTTTTGGAGCAAGTTTTGGTGCTGCTTTCTTGGTTATAGTAGTTGTAGCACTGGTT
CTTTGGTGGCGCTACCGGCATAATCAGCAGATCTTCTTTGATGTCAATGAGCAATATGAT
CCAGAGATATGCTTGGGTCACTTGAAAAGATATGCCTTTAAGGAACTGCGGACTGCAACT
GATCATTTTAGCTCAAAAAATATTTTGGGGAGCGGAGGATTTGGAGTTGTGTACAAGGGC
CGCTTAAATAATGGAACTGTTGTGGCTGTCAAAAGATTGAAGGACTACAATGCTGTTGGT
GGTGAAATCCAATTTCAGACAGAGGTCGAGTTGATTAGTTTGGCTGTCCATCGAAATCTT
CTCCGTCTTTGGGGTTTTTGCTCGACTGAAAATGAGCGGCTTCTTGTTTACCCTTATATG
CCAAATGGAAGCGTAGCAGCACGATTAAAAGATCACATCCATGGCAGGCCAGTTTTGGAC
TGGTCAAGGCGGAAAAACATAGCATTAGGTACAGCAAGAGGGCTGGTATATTTGCATGAG
CAGTGTGACCCCAAAATAATCCACCGTGATGTTAAAGCAGCCAATATTCTGTTGGATGAG
GAATTTGAGGCAGTTGTTGGAGACTTTGGGTTGGCAAAGCTCTTGGATCACCGGGATTCC
CATGTAACGACTGCTGTCAGGGGCACCGTTGGCCACATTGCTCCAGAATATTTGTCTACT
GGTCAATCATCAGAGAAAACTGATGTGTTTGGGTTTGGAATCTTGCTTCTTGAGCTAATT
ACAGGTCAGAAAGCTGTGGATTTTGGACGAGGGGCCAACCAGAAAGGTGTTATGCTTGAC
TGGGTAAAAACGCTTCATCAAGAGAAAAAGCTGAACCTTATGGTGGATAAGGATTTAAAG
AACAGCTTTGACCGGATTGAACTTGAAGAGATGGTTCAAGTTGCACTTCTGTGTACTCAT
TTCAGTCCTTCTCATCGCCCAAAGATGTCCGAGGTATTAAGGATGCTGGAGGGAGATGGA
TTAGCGGAAAAATGGGAGGCTTCACAAAAAGTCGAAACTCCAAGGTACAGAACTTCTGAA
AATACACCAAAAAGATATTCCGACTATATAGAAGAATCATCACTAGTAGTTGAAGCAATG
GAGCTTTCAGGACCTAGATGA

Peptide Sequence

PEP ID

XP_016466419.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 3-like [Nicotiana tabacum]
Sequence

MEGKWCMLWYVGLLVLTLMESCYASLSPTGINYEVVALTEIKKALHDPYNVLENWDVTSV
DPCSWRMVTCSIDGYVSALGLPSQSLSGTLSPGIGNLTKLQSVLLQNNAISGPIPDVIGN
LEKLQTLDLSNNKFEGEMPASFGDLRNLNYLRLNNNSLTGSIPQYLSNIEGLALVDVSFN
NLGGPLPKISARAFKVVGNPLICGQSSGNNCSAVYPEPLSFPPDSLGDKSGAGGKSHHVA
VAFGASFGAAFLVIVVVALVLWWRYRHNQQIFFDVNEQYDPEICLGHLKRYAFKELRTAT
DHFSSKNILGSGGFGVVYKGRLNNGTVVAVKRLKDYNAVGGEIQFQTEVELISLAVHRNL
LRLWGFCSTENERLLVYPYMPNGSVAARLKDHIHGRPVLDWSRRKNIALGTARGLVYLHE
QCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST
GQSSEKTDVFGFGILLLELITGQKAVDFGRGANQKGVMLDWVKTLHQEKKLNLMVDKDLK
NSFDRIELEEMVQVALLCTHFSPSHRPKMSEVLRMLEGDGLAEKWEASQKVETPRYRTSE
NTPKRYSDYIEESSLVVEAMELSGPR

Transcript Sequence

Gene sequence data has not been registered.